Journal of Guangxi Normal University(Natural Science Edition) ›› 2021, Vol. 39 ›› Issue (1): 17-28.doi: 10.16088/j.issn.1001-6600.2020092403

Previous Articles     Next Articles

Characteristics of the Orthoptera Mitogenome and Its Application

LIU Jing1, BIAN Xun2,3*   

  1. 1. College of Life Sciences, Guangxi Normal University, Guilin Guangxi 541006, China;
    2. Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin Guangxi 541006, China;
    3. Guangxi Key Laboratory of Rare and Endangered Animal Ecology (Guangxi Normal University), Guilin Guangxi 541006, China
  • Received:2020-09-24 Revised:2020-10-18 Online:2021-01-25 Published:2021-03-27

PDF (PC)

499

Abstract: Orthoptera is the largest group of hemimetabolous insects, with more than 28 000 known species in the world. With the development of molecular techniques, mitogenomes have been widely used in evolutionary and phylogenetic studies on Orthoptera because of their rapid evolutionary rate, maternal inheritance and infrequent recombination. Up to now, complete mitogenomes of two hundred and twenty-three species of orthopterines have been sequenced and submitted to GenBank database, including 143 species in Caelifera and 80 in Ensifera. The mitogenome of Orthoptera insects is about 16 kb in length, including 37 coding genes and a control region. It is a covalently closed double-stranded structure, and the base composition has an obviously high A+T content. Mitogenome has shown many advantages in addressing the phylogeny and evolution of Orthoptera, but there are also some shortcomings, such as inadequate research groups, lack of data information and so on.

Key words: Orthoptera, mitogenomes, molecular phylogenetics, phylogeny, molecular evolution

CLC Number: 

  • Q961
[1] CIGLIANO M M, BRAUN H, EADES D C, et al. Orthoptera Species File(Version 5.0/5.0.)[EB/OL]. [2020-07-31].http://orthoptera.speciesfile.or/HomePage/Orthoptera/HomePage.aspx.
[2] DEVI S. Locust swarms in East Africa could be “a catastrophe”[J]. Lancet, 2020, 395(1224): 547.
[3] CHANG H H, QIU Z Y, YUAN H et al. Evolutionary rates of and selective constraints on the mitochondrial genomes of Orthoptera insects with different wing types[J]. Molecular Phylogenetics and Evolution, 2020, 145: 106734.
[4] SHEFFIELD N C, HIATT K D, VALENTINE M C, et al. Mitochondrial genomics in Orthoptera using MOSAS[J]. Mitochondrial DNA, 2010, 21(3/4): 87-104.
[5] ZHANG H L, HUANG Y, LIN L L, et al. The phylogeny of the Orthoptera(Insecta) as deduced from mitogenomic gene sequences[J]. Zoological Studies, 2013, 52(1): 1-13.
[6] LEAVITT J R, HIATT K D, WHITING M F, et al. Searching for the optimal data partitioning strategy in mitochondrial phylogenomics: A phylogeny of Acridoidea (Insecta: Orthoptera: Caelifera) as a case study[J]. Molecular Phylogenetics and Evolution, 2013, 67(2): 494-508.
[7] SONG H, AMÉDÉGNATO C, CIGLIANO M M, et al. 300 million years of diversification: elucidating the patterns of orthopteran evolution based on comprehensive taxon and gene sampling[J]. Cladistics, 2015, 31(6): 621-651.
[8] FENN J D, SONG H, CAMERON S L, et al. A preliminary mitochondrial genome phylogeny of Orthoptera (Insecta) and approaches to maximizing phylogenetic signal found within mitochondrial genome data[J]. Molecular Phylogenetics and Evolution, 2008, 49(1): 59-68.
[9] CHANG H H, NIE Y M, ZHANG N, et al. MtOrt: an empirical mitochondrial amino acid substitution model for evolutionary studies of Orthoptera insects[J]. BMC Evolutionary Biology, 2020, 20(1): 57-72.
[10] FLOOK P K, ROWELL C H, GELLISSEN G. The sequence, organization, and evolution of the Locusta migratoria mitochondrial genome[J]. Journal of Molecular Evolution, 1995, 41(6): 928-941.
[11] 刘念, 胡婧, 黄原. 应用长PCR扩增蝗虫线粒体全基因组[J]. 动物学杂志, 2006, 41(2): 61-65.
[12] LI R, SHU X H, LI X D, et al. Comparative mitogenome analysis of three species and monophyletic inference of Catantopinae (Orthoptera: Acridoidea)[J]. Genomics, 2019, 111(6): 1728-1735.
[13] ZHANG H L, ZENG H H, HUANG Y, et al. The complete mitochondrial genomes of three grasshoppers, Asiotmethis zacharjini, Filchnerella helanshanensis and Pseudotmethis rubimarginis (Orthoptera: Pamphagidae)[J]. Gene, 2013, 517(1): 89-98.
[14] QIU Z Y, ZHANG X H, CUI Y Y, et al. Characterization of the complete mitochondrial genome of Euchorthippus unicolor (Orthoptera: Arcypteridae)[J]. Mitochondrial DNA Part B, 2019, 4(1): 846-847.
[15] LI R, WANG Y Q, SHU X H, et al. Complete mitochondrial genomes of three Oxya grasshoppers (Orthoptera) and their implications for phylogenetic reconstruction[J]. Genomics, 2020, 112(1): 289-296.
[16] CHEN L P, ZHEN Y F, BAI J, et al. Comparative analysis of mitogenomes among six species of grasshoppers (Orthoptera: Acridoidea: Catantopidae) and their phylogenetic implications in wing-type evolution[J]. International Journal of Biological Macromolecules, 2020, 159: 1062-1072.
[17] HAN H B, WANG N, XU L B, et al. The complete mitochondrial genome of Calliptamus abbreviatus Ikovnnikov (Orthoptera: acridoidea)[J]. Mitochondrial DNA Part B, 2016, 1(1): 770-771.
[18] ZHI Y C, ZHANG N, LU X C, et al. The complete mitochondrial genome of Peripolus nepalensis Uvarov, 1942 (Orthoptera: Acridoidea: Catantopidae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 26-27.
[19] SUN H M, ZHENG Z M, HUANG Y. Sequence and phylogenetic analysis of complete mitochondrial DNA genomes of two grasshopper species Gomphocerus rufus (Linnaeus, 1758) and Primnoa arctica (Zhang and Jin, 1985)(Orthoptera: Acridoidea)[J]. Mitochondrial DNA, 2010, 21(3/4): 115-131.
[20] ERLER S, FERENZ H J, MORITZ R F A, et al. Analysis of the mitochondrial genome of Schistocerca gregaria gregaria (Orthoptera: Acrididae)[J]. Biological Journal of the Linnean Society, 2010, 99(2): 296-305.
[21] GAO S, CHEN J J, JIANG G F. Complete mitochondrial genome of bamboo grasshopper, Ceracris fasciata, and the phylogenetic analyses and divergence time estimation of Caelifera (Orthoptera)[J]. Bulletin of Entomological Research, 2018, 108(3): 321-336.
[22] XU Q, HAO Y, MEI K T, et al. The complete mitochondrial genome of Ceracris versicolor (Orthoptera: Acridoidea: Arcypteridae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 512-513.
[23] DENG J L, YU Z Q, NING J, et al. Complete mitochondrial genome and phylogenetic analysis of a Chorthippus fallax (Zuboxsky) isolated in rangeland of northwest region of China[J]. Mitochondrial DNA Part B, 2020, 5(1): 61-62.
[24] LI R, DENG W A, SHU X H, et al. Characterization of the complete mitochondrial genome of Dnopherula yuanmowensis (Orthoptera: Acrididae) and its phylogenetic implications[J]. Mitochondrial DNA Part B, 2019, 4(1): 709-710.
[25] ZHAO L, ZHENG Z M, HUANG Y, et al. A comparative analysis of mitochondrial genomes in Orthoptera (Arthropoda: Insecta) and genome descriptions of three grasshopper species[J]. Zoological Science, 2010, 27(8): 662-672.
[26] YIN H, ZHI Y C, JIANG H D, et al. The complete mitochondrial genome of Gomphocerus tibetanus Uvarov, 1935 (Orthoptera: Acrididae: Gomphocerinae)[J]. Gene, 2012, 494(2): 214-218.
[27] ZHANG H L, ZHAO L, ZHENG Z M, et al. Complete mitochondrial genome of Gomphocerus sibiricus (Orthoptera: Acrididae) and comparative analysis in four Gomphocerinae mitogenomes[J]. Zoological Science, 2013, 30(3): 192-204.
[28] ZHANG Q, GUO C N, HUANG Y. The complete mitochondrial genome of Gonista bicolor (Haan) (Orthoptera: Acrididae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(6): 4578-4579.
[29] SONG W W, ZHI Y C, LIU G J, et al. The complete mitochondrial genome of Orinhippus tibetanus Uvarov, 1921 (Orthoptera: Acridoidea: Gomphoceridae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 76-77.
[30] SHI H W, DING F M, HUANG Y. Complete sequencing and analysis of mtDNA in Phlaeoba albonema Zheng[J]. Chinese Journal of Biochemistry and Molecular Biology, 2008, 24(7): 604-611.
[31] SONG W W, YE B H, CAO X W, et al. The complete mitochondrial genome of Phlaeoba tenebrosa (Orthoptera: Acridoidea: Acrididae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 409-410.
[32] LIU F, QIU Z Y. The complete mitochondrial genome of Phlaeoba infumata (Orthoptera: Acrididae)[J]. Mitochondrial DNA Part B, 2016, 1(1): 293-294.
[33] LIU F, QIU Z Y. The complete mitochondrial genome of Fruhstorferiola huayinensis (Orthoptera: Catantopidae)[J]. Mitochondrial DNA Part B, 2016, 1(1): 273-274.
[34] ZHANG X M, LIN L L. The complete mitochondrial genome of Fruhstorferiola tonkinensis (Orthoptera: Catantopidae)[J]. Mitochondrial DNA Part B, 2016, 1(1): 434-435.
[35] ZHI Y C, LIU B, HAN G F, et al. The complete mitochondrial genome of Kingdonella bicollina (Orthoptera: Acridoidea: Catantopidae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 391-392 .
[36] ZHANG X M, LI X J, LIU F, et al. The complete mitochondrial genome of Tonkinacris sinensis (Orthoptera: Acrididae): A tRNA-like sequence and its implications for phylogeny[J]. Biochemical Systematics and Ecology, 2017, 70: 147-154.
[37] HAN H B, ZHOU X R, PANG B P. The complete mitochondrial genome of Angaracris rhodopa Fischer & Walheim (Orthoptera: Acridoidea)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(3): 2127-2128.
[38] HAN H B, ZHOU X R, PANG B P. The complete mitochondrial genome of Angaracris barabensis Pallas (Orthoptera: Acridoidea)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(3): 1827-1828.
[39] MA C, LIU C X, YANG P, et al. The complete mitochondrial genomes of two band-winged grasshoppers, Gastrimargus marmoratus and Oedaleus asiaticus[J]. BMC Genomics, 2009, 10(1): 156.
[40] YE H Y, XIAO L L, ZHOU Z J, et al. Complete mitochondrial genome of Locusta migratoria migratoria (Orthoptera: Oedipodidae): three tRNA-like sequences on the N-strand[J]. Zoological Science, 2012, 29(2): 90-96.
[41] 常会会,杨丽平,刘菲,等. 无齿稻蝗和黄翅踵蝗线粒体基因组与系统发育分析[J]. 基因组学与应用生物学, 2018, 37(1): 210-218.
[42] CHANG H H, HUANG Y. The complete mitochondrial genome of the Hieroglyphus tonkinensis (Orthoptera: Acrididae)[J]. Mitochondrial DNA Part B, 2016, 1(1): 534-535.
[43] ZHANG Y L, LIU B, ZHANG H Y, et al. The complete mitochondrial genome of Pacris xizangensis (Orthoptera: Acridoidea: Gomphoceridae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 320-321.
[44] 杨辉,黄原. 郑氏比蜢线粒体基因组全序列的测定与分析[J]. 动物学研究,2011, 32(4): 353-362.
[45] LI X J, ZHI Y C, YIN Z, et al. The complete mitochondrial genome of Humphaplotropis culaishanensis sp. nov. (Orthoptera: Acridoidea: Pamphagidae: Pamphaginae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(1): 132-133.
[46] LI X J, ZHI Y C, LANG L, et al. The complete mitochondrial genome of Filchnerella beicki Ramme, 1931 (Orthoptera: Acridoidea: Pamphagidae)[J]. Mitochondrial DNA, 2014, 25(5): 348-349.
[47] SHI Q Y, ZHENG J Y, ZHI Y C, et al. The complete mitochondrial genome of Sinotmethis brachypterus Zheng & Xi, 1985 (Orthoptera: Acridoidea: Pamphagidae: Prionotropisinae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(6): 4063-4064.
[48] ZHANG D C, ZHI Y C, YIN H, et al. The complete mitochondrial genome of Thrinchus schrenkii (Orthoptera: Caelifera, Acridoidea, Pamphagidae)[J]. Molecular Biology Reports, 2011, 38(1): 611-619.
[49] XIAO B, CHEN W, HU C C, et al. Complete mitochondrial genome of the groundhopper Alulatettix yunnanensis (Insecta: Orthoptera: Tetrigoidea)[J]. Mitochondrial DNA, 2012, 23(4): 286-287.
[50] XIAO B, FENG X, MIAO W J, et al. The complete mitochondrial genome of grouse locust Tetrix japonica (Insecta: Orthoptera: Tetrigoidea)[J]. Mitochondrial DNA, 2012, 23(4): 288-289.
[51] ZHANG X X, GUAN D L, XU S Q, et al. Characterization of the complete mitochondrial genome of the ecotoxicity indicator insect Aiolopus thalassinus (Orthoptera; Acrididae; Oedipodinae)[J]. Conservation Genetics Resources, 2017, 9: 423-426.
[52] YANG J, LU C, ZHANG Z B et al. Mitochondrial genomes of two pygmy grasshoppers (Orthoptera: Tetrigoidea) and a comparative analysis of caelifera mitogenomes[J]. Zoological Science, 2017, 34(4): 287-294.
[53] YUAN H, QIU Z Y, YANG C, et al. The complete mitochondrial genome sequence of Caryanda elegans (Orthoptera: Acrididae)[J]. Mitochondrial DNA Part B, 2019, 4(1): 1580-1581.
[54] CHEN S C, JIANG H Y, HU X, et al. Characterization of the complete mitochondrial genome of a grasshopper, Catantops pinguis (Orthoptera: Catantopidae)[J]. Mitochondrial DNA Part B, 2019, 4(1): 1656-1657.
[55] HU Z, HAN Y P, GUAN D L, et al. Characterization of the complete mitochondrial genome of the Yunnan endemic grasshopper Longchuanacris curvifurculus (Insecta: Orthoptera: Catantopidae)[J]. Mitochondrial DNA Part B, 2018, 3(2): 670-671.
[56] YANG J, LIU Y, LIU N. The complete mitochondrial genome of the Xenocatantops brachycerus (Orthoptera: Catantopidae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(4): 2844-2845.
[57] CHEN Z M, XU S Q. The complete mitochondrial DNA genome sequence of a terrestrial grasshopper, Curvipennis wixiensis (Acrididae: Podismini)[J]. Conservation Genetics Resources, 2017, 9: 115-118.
[58] YANG R, GUAN D L, XU S Q. Complete mitochondrial genome of the Chinese endemic grasshopper Fruhstorferiola kulinga (Orthoptera: Acrididae: Podismini)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2016, 27(5):3240-3241.
[59] HU Z, GUAN D L, MAO B Y.Characterization of the complete mitochondrial genome of the Yunnan endemic grasshopper Yunnanacris yunnaneus (Insecta: Orthoptera: Acrididae)[J]. Conservation Genetics Resources, 2016, 8(3): 267-270.
[60] GUO C N, ZHANG Q, HUANG Y. The complete mitochondrial genome of the Oedaleus infernalis sauss (Orthoptera: Oedipodidae)[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2017, 28(1):89-90.
[61] TANG M, TAN M H, MENG G L, et al. Multiplex sequencing of pooled mitochondrial genomes-a crucial step toward biodiversity analysis using mito-metagenomics[J]. Nucleic Acids Research, 2014, 42(22): e166.
[62] KIM I, CHA S Y, YOON M H, et al. The complete nucleotide sequence and gene organization of the mitochondrial genome of the oriental mole cricket,Gryllotalpa orientalis (Orthoptera: Gryllotalpidae)[J]. Gene, 2005, 353(2): 155-168.
[63] ZHOU Z J, ZHAO L, LIU N, et al. Towards a higher-level Ensifera phylogeny inferred from mitogenome sequences[J]. Molecular Phylogenetics and Evolution, 2017, 108: 22-33.
[64] ZHOU Z J, HUANG Y, SHI F M. The mitochondrial genome of Ruspolia dubia (Orthoptera: Conocephalidae) contains a short A+T-rich region of 70 bp in length[J]. Genome, 2007, 50(9): 855-866.
[65] LI J J, CHEN Q, WEN M, et al. Phylogeny and acoustic signal evolution of a pure tone song katydid Pseudophyllus titan (Orthoptera: Tettigoniidae) based on the complete mitogenome[J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2019, 30: 385-396.
[66] LIU C X, CHANG J, MA C, et al. Mitochondrial genomes of two Sinochlora species (Orthoptera): novel genome rearrangements and recognition sequence of replication origin[J]. BMC Genomics, 2013, 14(1): 114-119.
[67] YANG J, YE F, HUANG Y. Mitochondrial genomes of four katydids (Orthoptera: Phaneropteridae): New gene rearrangements and their phylogenetic implications[J]. Gene, 2016, 575(2 Pt 3): 702-711.
[68] ZHOU Z J, YE H Y, HUANG Y, et al. The phylogeny of Orthoptera inferred from mtDNA and description of Elimaea cheni (Tettigoniidae: Phaneropterinae) mitogenome[J]. Journal of Genetics and Genomics, 2010, 37(5): 315-324.
[69] DONG J J, VICENTE N, CHINTAUAN-MARQUIER I C, et al. Complete mitochondrial genome and taxonomic revision of Cardiodactylus muiri Otte, 2007 (Gryllidae: Eneopterinae: Lebinthini)[J]. Zootaxa, 2017, 4268(1): 101-116.
[70] YANG J, REN Q L, HUANG Y. Complete mitochondrial genomes of three crickets (Orthoptera: Gryllidae) and comparative analyses within Ensifera mitogenomes[J]. Zootaxa, 2016, 4092(4): 529-547.
[71] ZHOU Z J, SHI F M, ZHAO L. The first mitochondrial genome for the superfamily Hagloidea and implications for its systematic status in Ensifera[J]. PLoS One, 2014, 9(1): e86027.
[72] ZHOU Z J, HUANG Y, SHI F M, et al. The complete mitochondrial genome of Deracantha onos (Orthoptera: Bradyporidae)[J]. Molecular Biology Reports, 2009, 36(1): 7-12.
[73] YANG M R, ZHOU Z J, CHANG Y L, et al. The mitochondrial genome of the quiet-calling katydids, Xizicus fascipes (Orthoptera: Tettigoniidae: Meconematinae)[J]. Journal of Genetics, 2012, 91(2): 141-153.
[74] 周志军, 杨明茹, 常岩林, 等. 两种纺织娘线粒体基因组的比较分析[J]. 昆虫学报, 2013, 56(4): 408-418.
[75] FENN J D, CAMERON S L, WHITING M F. The complete mitochondrial genome sequence of the Mormon cricket (Anabrus simplex: Tettigoniidae: Orthoptera) and an analysis of control region variability[J]. Insect Molecular Biology, 2007, 16(2): 239-252.
[76] ZHOU Z J, SHI F M, HUANG Y, et al. The complete mitogenome of the Chinese bush cricket, Gampsocleis gratiosa (Orthoptera: Tettigonioidea)[J]. Journal of Genetics and Genomics, 2008, 35(6): 341-348.
[77] 刘菲. 四川华绿螽线粒体基因组序列分析[J]. 基因组学与应用生物学,2016,35(8): 2007-2014.
[78] 刘菲, 刘卉珺, 毛少利, 等. 异刺草螽线粒体基因组序列分析[J]. 基因组学与应用生物学, 2017, 36(9): 3712-3719.
[79] 刘菲. 日本条螽线粒体基因组序列的测定与分析[J]. 基因组学与应用生物学, 2017, 36(7): 2821-2825.
[80] 刘菲. 贺氏东栖螽线粒体基因组序列分析(直翅目: 螽斯科)[J]. 基因组学与应用生物学, 2017, 36(8): 3194-3199.
[81] LIU F. Next-generation sequencing yields the complete mitochondrial genome of Conanalus pieli (Orthoptera: Tettigoniidae)[J]. Mitochondrial DNA Part B, 2019, 4(1): 116-117.
[82] ÖZTÜRK P N, ÇIPLAK B. Phylomitogenomics of Phaneropteridae (Orthoptera): Combined data indicate a poorly conserved mitogenome[J]. International Journal of Biological Macromolecules, 2019, 132: 1318-1326.
[83] MA C, LI J K. Comparative analysis of mitochondrial genomes of the superfamily Grylloidea (Insecta, Orthoptera) reveals phylogenetic distribution of gene rearrangements[J]. International Journal of Biological Macromolecules, 2018, 120(PtA): 1048-1054.
[84] GUAN B, GUO H F, ZHOU Z J. Illumina next-generation sequencing reveals the mitochondrial genome of Ducetia japonica (Orthoptera: Tettigoniidae)[J]. Mitochondrial DNA Part B, 2016, 1(1): 361-362.
[85] KARŞI U, CIPLAK B. Mitogenome of Anterastes babadaghi (Orthoptera: Tettigoniinae; Platycleidini): Frequent conserved overlapping regions within Tettigoniinae[J]. Zootaxa, 2019, 4651(1): 173-190.
[86] MA C, WANG Y Y, ZHANG L C, et al. Mitochondrial genome characterization of the family Trigonidiidae (Orthoptera) reveals novel structural features and nad1 transcript ends[J]. Scientific Reports, 2019, 9(1): 19092.
[87] MAO S L, YUAN H, LU C, et al. The complete mitochondrial genome of Xizicus (Haploxizicus) maculatus revealed by Next-Generation Sequencing and phylogenetic implication (Orthoptera, Meconematinae)[J]. ZooKeys, 2018, 773: 57-67.
[88] MAO S L, YUAN H, CHANG H H, et al. Comparative mitochondrial genomics of Shoveliteratura triangula (Orthoptera, Tettigoniidae, Meconematinae) and the first description of a female specimen[J]. Zootaxa, 2020, 4751(3): 507-520.
[89] MA C, ZHANG L C, LI J K. Characterization of the complete mitochondrial genome of a bush cricket Xenogryllus marmoratus (Insecta: Orthoptera)[J]. Mitochondrial DNA Part B, 2019, 4(1): 172-173.
[90] ZHOU J X, JIA Y C, YANG X H, et al. The complete mitochondrial genome of the black field cricket, Teleogryllus oceanicus [J]. Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis, 2017, 28(2): 229-230.
[91] SONG N, LI H, SONG F, et al. Molecular phylogeny of Polyneoptera (Insecta) inferred from expanded mitogenomic data[J]. Scientific Reports, 2016, 6(1): 36175.
[92] LIU F. Complete mitochondrial genome of Conocephalus melaenus (Orthoptera: Tettigoniidae): A tRNA-like sequence on the J-strand[J]. Mitochondrial DNA Part B, 2018, 3(1): 105-106.
[93] HAN N, YUAN H, WANG J, et al. Mitochondrial genome of a brachypterous species in Meconematinae: Acosmetura nigrogeniculata and its phylogenetic implication[J]. Mitochondrial DNA Part B, 2019, 4(2): 2098-2099.
[94] MAO S L, QIU Z Y, LI Q, et al. Complete mitochondrial genome of Xiphidiopsis (Xiphidiopsis) gurneyi (Orthoptera, Tettigoniidae, Meconematinae)[J]. Mitochondrial DNA Part B, 2018, 3(2): 630-631.
[95] LIU F. Sequencing and analysis of the complete mitochondrial genome of Metrioptera bonneti (Orthoptera: Tettigoniidae)[J]. Mitochondrial DNA Part B, 2018, 3(2): 1165-1166.
[96] CAMERON S L. Insect mitochondrial genomics: implications for evolution and phylogeny[J]. Annual Review of Entomology, 2014, 59: 95-117.
[97] 李天杰, 曹延祥, 赵红翠, 等. 动物线粒体基因组测序方法的研究进展[J]. 天津医药, 2016, 44(6): 796-800.
[98] 沙淼, 林立亮, 李雪娟, 等. 线粒体基因组测序策略和方法[J]. 应用昆虫学报, 2013, 50(1): 293-297.
[99] 刘朋虎, 林冬梅, 林占熺, 等. DNA测序技术及其应用研究进展[J]. 福建农业学报, 2012, 27(10): 1130-1133.
[100] 黄原, 刘念, 卢慧甍. 直翅目昆虫线粒体基因组研究进展[J]. 昆虫学报, 2010, 53(5): 581-586.
[101] 匡卫民, 于黎. 基因组时代线粒体基因组拼装策略及软件应用现状[J]. 遗传, 2019, 41(11): 979-993.
[102] HANN C, BACHMAHH L, CHEVREUX B. Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach[J]. Nucleic Acids Research, 2013, 41(13): e129.
[103] MACHADO D J, LYRA M L, GRANT T. Mitogenome assembly from genomic multiplex libraries: comparison of strategies and novel mitogenomes for five species of frogs[J]. Molecular Ecology Resources,2016,16(3): 686-693.
[104] XIE Y L, WU G X,TANG J B, et al. SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads[J]. Bioinformatics (Oxford, England), 2014, 30(12): 1660-1666.
[105] MENG G L, LI Y Y, YANG C T, et al. MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization[J]. Nucleic Acids Research, 2019, 47(11): e63.
[106] National Center for Biotechnology Information. Bryodema kozlovi mitochondrion, complete genome[EB/OL].[2020-09-10]. https://www.ncbi.nlm.nih.gov/nuccore/MT499330.1.
[107] National Center for Biotechnology Information. Epacromius coerulipes mitochondrion, complete genome[EB/OL].[2020-09-10]. https://www.ncbi.nlm.nih.gov/nuccore/MT499331.1.
[108] National Center for Biotechnology Information. Filchnerella rubrimargina mitochondrion, complete genome[EB/OL].[2020-09-10].https://www.ncbi.nlm.nih.gov/nuccore/MT499332.1.
[109] National Center for Biotechnology Information. Oedaleus manjius mitochondrion, complete genome[EB/OL].[2020-09-10]. https://www.ncbi.nlm.nih.gov/nuccore/MT499333.1.
[110] BOORE J L. Animal mitochondrial genomes[J]. Nucleic Acids Research, 1999, 27(8): 1767-1780.
[111] 赵乐, 李雪娟, 黄原. 直翅目昆虫线粒体基因组特征及系统发育研究[J]. 生命科学, 2018, 30(1): 113-123.
[112] KING D C, TAYLOR J, ZHANG Y, et al.Finding cis-regulatory elements using comparative genomics: Some lessons from ENCODE data[J]. Genome Research, 2007, 17(6): 775-786.
[113] 刘银梅. 动物线粒体基因与进化研究进展[J]. 山西农业科学, 2007, 35(1): 80-82.
[114] 杨婧, 黄原. 线粒体基因组的高通量测序策略[J]. 生命科学, 2016, 28(1): 112-117.
[115] 杨泽民, 谢数涛, 章群, 等. RNA二级结构预测及其在分子分类研究中的应用[J]. 安徽农业科学, 2012, 40(7): 3919-3922, 3944.
[1] YANG Dandan, XIE Yongguang, BIN Shiyu, LUO Huahui, AN Miao, CHEN Dunxue. Mitochondrial Genome Characteristics and Phylogenetic Information of Siniperca undulata [J]. Journal of Guangxi Normal University(Natural Science Edition), 2019, 37(4): 119-126.
[2] ZHANG Xiaomin, LIN Yong, BIN Shiyu, YU Yanling,ZENG Lan, ZHONG Dandan, ZHANG Yongde. Phylogeny of Macrobrachium Species Using Mitochondrial16S Ribosomal DNA [J]. Journal of Guangxi Normal University(Natural Science Edition), 2017, 35(3): 133-140.
[3] QIN Xin-min, LI Hui-min, CAI Le-jing, ZENG De-long, GUAN Qing-xin. Phylogeny of Acanthosaura lepidogaster Based on Fragments ofMitochondrial 12SRNA,16SRNA and Cyt b Gene Sequences [J]. Journal of Guangxi Normal University(Natural Science Edition), 2012, 30(1): 71-76.
Viewed
Full text


Abstract

Cited
  Shared   
  Discussed   
[1] YANG Liting, LIU Xuecong, FAN Penglai, ZHOU Qihai. Research Progress in Vocal Communication of Nonhuman Primates in China[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 1 -9 .
[2] BIN Shiyu, LIAO Fang, DU Xuesong, XU Yilan, WANG Xin, WU Xia, LIN Yong. Research Progress on Cold Tolerance of Tilapia[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 10 -16 .
[3] LI Xingkang, ZHONG Enzhu, CUI Chunyan, ZHOU Jia, LI Xiaoping, GUAN Zhenhua. Monitoring Singing Behavior of Western Black Crested Gibbon (Nomascus concolor furvogaster)[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 29 -37 .
[4] HE Xinming, XIA Wancai, BA Sang, LONG Xiaobin, LAI Jiandong, YANG Chan, WANG Fan, LI Dayong. Grooming Strategies of Resident Males with Different Number of Mates in Yunnan Snub-nosed Monkeys (Rhinopithecus bieti)[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 38 -44 .
[5] FU Wen, REN Baoping, LIN Jianzhong, LUAN Ke, WANG Pengcheng, WANG Bing, LI Dayong, ZHOU Qihai. Jiyuan Taihang Mountain Macaque Population and Conservation Status[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 45 -52 .
[6] ZHENG Jingjin, LIANG Jipeng, ZHANG Kechu, HUANG Aimian, LU Qian, LI Youbang, HUANG Zhonghao. White-headed Langurs Select Foods Based on Woody Plants' Dominances[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 53 -64 .
[7] YANG Chan, WAN Yaqiong, HUANG Xiaofu, YUAN Xudong, ZHOU Hongyan, FANG Haocun, LI Dayong, LI Jiaqi. Activity Rhythm of Muntiacus reevesi Based on Infrared Camera Technology[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 65 -70 .
[8] LI Youbang, NONG Juanli, YANG Wanlin, ZHAO Jiajia, ZHU Qiqi. Daily Activity Patterns of Two Sympatric Squirrels Callosciurus erythraeus and Dremomys rufigenis in Nonggang, Guangxi, China[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 71 -78 .
[9] CHENG Rui, HE Mingxian, ZHONG Chunying, LUO Shuyi, WU Zhengjun. Comparison of Swimming Ability between Wild and Captive Breeding Shinisaurus crocodilurus[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 79 -86 .
[10] CHEN Danni, CHEN Zhilin, ZHOU Shanyi. A Checklist of Family Formicidae of China: Myrmecinae (Addendum) (Insect: Hymenoptera)[J]. Journal of Guangxi Normal University(Natural Science Edition), 2021, 39(1): 87 -97 .
Copyright © Journal of Guangxi Normal University(Natural Science Edition), All Rights Reserved.
Tel: 0773-5857325　E-mail: gxsdzkb@mailbox.gxnu.edu.cn
Powered by Beijing Magtech Co. Ltd