Journal of Guangxi Normal University(Natural Science Edition) ›› 2011, Vol. 29 ›› Issue (3): 142-146.
Previous Articles Next Articles
XU Dan, WANG Ai-rong, LI Jin-ming
CLC Number:
| [1] GARDNER P P,GIEGERICH R.A comprehensive comparison of comparative RNA structure prediction approaches[J].BMC Bioinformatics,2004,5(1):140. [2] ZUKER M,STIEGLER P.Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information[J].Nucleic Acids Research,1981,9(1):133-148. [3] ZUKER M.On finding all suboptimal foldings of an RNA molecular[J].Science,1989,244(4900):48-52. [4] JESSICA S R,DAVID H M.RNAstructure:software for RNA secondary structure prediction and analysis[J/OL].BMC Bioinformatics,2010,11:129[2011-4-22].http://www.biomedcentral.com/content/pdf/1471-2105-11-129.pdf [5] LYNGS R B,ZUKER M,PEDERSEN C N.Fast evaluation of internal loopsin RNA secondary structure prediction[J].Bioinformatics,1999,15(6):440-445. [6] DOWELL R D,EDDY S R.Evaluation of several lightweight stochasticcontext-free grammars for RNA secondary structure prediction[J/OL].BMC Bioinformatics,2004,5:71[2011-4-22].http://www.biomedcentral.com/content/pdf/1471-2105-5-71.pdf. [7] HOFACKER I L,SCHUSTER P,STADLER P E.Combinatorics of RNA secondary structures[J].Discrete Applied Mathematics,1998,88(1/3):207-237. [8] HU Yuh-Jyh.Prediction of consensus structural motifs in a familyof coregulated RNA sequences[J].Nucleic Acids Research,2002,30(17):3886-3893. [9] SHAPIRO B A,WU Jin-chu,BENGALI D,et al.The massively parallelgenetic algorithm for RNA folding:MIMD implementation and population variation[J].Bioinformatics,2001,17(2):137-148. [10] WIESE K C,DESCHENES A A,HENDRIKS A G.RnaPredict—an evolutionaryalgorithm for RNA secondary structure prediction[J].IEEE/ACM Transactions on Computational Biology and Bioinformatics,2008,5(1):25-41. [11] TAKEFUJI Y,CHEN Li-lin,LEE K C,et al.Parallel algorithms forfinding a near-maximum independent set of a circle graph[J].IEEE Transactionon Neural Networks,1990,1(3):263-267. [12] TAKEFUJI Y,LIN C W,LEE K C.A parallel algorithm for estimatingthe secondary structure in ribonucleic acids[J].Biological Cybernetics,1990,63(5):337-340. [13] TINOCO I,UHLENBECK O C,LEVINE M D.Estimation of secondary structure in ribonucleic acids[J].Nature,1971,230:362-367. [14] MATHEWS D H,SABINA J,ZUKER M,et al.Expanded sequence dependenceof thermodynamic parameters improves prediction of RNA secondary structure[J].Journal of Molecular Biology,1999,288(5):911-940. [15] 刘琦,张引,叶修梓,等.基于离散Hopfield网络求解极大独立集的茎区选择算法以及在RNA二级结构预测中的应用[J].计算机学报:2008,31(1):51-58. [16] ZOU Quan,ZHAO Tuo,LIU Yang,et al.Predicting RNA secondary structure based on the class information and Hopfield network[J].Computers in Biology and Medicine,2009,39(3):206-214. [17] 邹权,郭茂祖,刘扬.质心法:受类别驱动的RNA二级结构预测方法[J].南京大学学报:自然科学版,2009,45(5):677-688. [18] JIANG Tao,XU Ying,ZHANG Michael Q.Current topics in computational molecular biology[M].Cambridge,Massachusetts,England:The MIT Press,2004:345-364. [19] BALDI P,BRUNAK S,CHAUVIN Y,et al.Assessing the accuracy of prediction algorithms for classication:an overview[J].Bioinformatics,2000,16(5):412-424. |
| [1] | ZHENG Tao, ZHOU Xinran, ZHANG Long. Global Asymptotic Stability of Predator-Competition-Cooperative Hybrid Population Models of Three Species [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(5): 64-70. |
| [2] | LÜ Xiaojun, ZHAO Kaihong, LI Rui. Multiple Positive Periodic Solutions of a Discrete Non-autonomousPlankton Allelopathy System [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(4): 66-73. |
| [3] | GE Yifei, ZHENG Yanbin. Private Information Retrieval Schemes with Erasure-correcting or Error-correcting Properties [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(3): 33-44. |
| [4] | ZHANG Erli, XING Yuqing. Bifurcation of Limit Cycle for Non-Hamilton System with Invariant Straight Lines [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(3): 45-51. |
| [5] | CHEN Xiong, ZHU Yu, FENG Ke, YU Tongwei. Identity Authentication of Power System Safetyand Stability Control Terminals Based on Blockchain [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(2): 8-18. |
| [6] | LIU Xin, LUO Xiaoshu, ZHAO Shulin. Active Disturbance Rejection Control of Three-AxisStabilized Platform Based on BP Neural Network [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(2): 115-120. |
| [7] | GAO Hongjuan, HAN Huiqing, LUO Xuqiang, LI Jinyan, CHEN Mengling, ZHANG Xinding. Effects of Land Use Change on Freshwater Ecosystem Services in Guizhou, China [J]. Journal of Guangxi Normal University(Natural Science Edition), 2020, 38(1): 157-163. |
| [8] | LI Jiankang,WEI Duqu,LUO Xiaoshu,QIN Yinghua. Study on Chaotic Synchronization Control of Distributed Generation System and Inductive Load Network [J]. Journal of Guangxi Normal University(Natural Science Edition), 2019, 37(3): 33-41. |
| [9] | HE Dongping,HUANG Wentao ,WANG Qinlong. Limit Cycle Flutter and Chaostic Motion of Two-Dimensional Airfoil System [J]. Journal of Guangxi Normal University(Natural Science Edition), 2019, 37(3): 87-95. |
| [10] | HONG Lingling, YANG Qigui. Research on Complex Dynamics of a New 4D Hyperchaotic System [J]. Journal of Guangxi Normal University(Natural Science Edition), 2019, 37(3): 96-105. |
| [11] | ZHANG Yijin. Random Dynamics for Stochastic Delay Lattice Systems in Xρ Space [J]. Journal of Guangxi Normal University(Natural Science Edition), 2019, 37(3): 106-110. |
| [12] | MIAO Xinyan, ZHANG Long, LUO Yantao, PAN Lijun. Study on a Class of Alternative Competition-Cooperation Hybrid Population Model [J]. Journal of Guangxi Normal University(Natural Science Edition), 2018, 36(3): 25-31. |
| [13] | HUANG Weiqi, JIN Wenzhou, HUANG Jingxiang, HAN Bowen. Pricing Problem of Customized Bus under Different Market Strategies [J]. Journal of Guangxi Normal University(Natural Science Edition), 2018, 36(2): 8-17. |
| [14] | MEI Chuncao， WEI Duqu*， LUO Xiaoshu. Stability Analysis of Inductive Load of Distributed Generation System [J]. Journal of Guangxi Normal University(Natural Science Edition), 2018, 36(2): 50-55. |
| [15] | WAN Lei,LUO Yuling,HUANG Xingyue. Monitoring Platform for the Hardware Spike Neural Networks [J]. Journal of Guangxi Normal University(Natural Science Edition), 2018, 36(1): 9-16. |
|
||